PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS64790.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 166aa    MW: 18733.2 Da    PI: 7.4294
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS64790.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.84.1e-131156454
                HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +h e+ErrRR+riN  +++Lr++lP       +K +Ka+ L +Av+ +++L
  EPS64790.1 11 SHREAERRRRKRINGHIATLRSILPDV-----TKTDKASLLGEAVRRVREL 56
                7*************************8.....8************998887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.307756IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.1E-13959IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.02E-131165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-101156IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.1E-121362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048731.15E-597161No hitNo description
SuperFamilySSF550211.65E-597162No hitNo description
Gene3DG3DSA:3.30.70.2601.6E-697161No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
AEEEARATND SHREAERRRR KRINGHIATL RSILPDVTKT DKASLLGEAV RRVRELNKAA  60
EELRPSDDAD AFLLPGETDE VKVVEEKNSG RLVMKATLCC QDRPEILTEL RRALKSVEAR  120
VVRAEMSTVG GRTKSVLWVE LNADEERESE DAGMSRLRRA LKGIME
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009605433.11e-54PREDICTED: transcription factor bHLH30-like
RefseqXP_016469430.11e-54PREDICTED: transcription factor bHLH30-like
RefseqXP_009773084.11e-54PREDICTED: transcription factor bHLH30-like isoform X2
RefseqXP_016492181.11e-54PREDICTED: transcription factor bHLH30-like
TrEMBLS8CD131e-114S8CD13_9LAMI; Uncharacterized protein (Fragment)
STRINGPGSC0003DMT4000606151e-49(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72832231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.11e-34bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]